Pre_GI: BLASTP Hits

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Query: NC_016830:4914406:4916622 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4916622, End: 4917950, Length: 1329

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:5002595:5004813500481350061411329Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein0853
NC_009901:2427291:2436882243688224382041323Shewanella pealeana ATCC 700345, complete genomeAAA ATPase7e-99361
NC_010334:2749250:2766054276605427673761323Shewanella halifaxensis HAW-EB4, complete genomeAAA ATPase7e-97354
NC_016002:2453919:2486576248657624878861311Pseudogulbenkiania sp. NH8B, complete genomeAAA ATPase5e-94345
NC_009831:2884851:2887208288720828885241317Shewanella sediminis HAW-EB3, complete genomehypothetical protein3e-87322
NC_007614:2675302:2676138267613826775741437Nitrosospira multiformis ATCC 25196 chromosome 1, completeATPase2e-82306
NC_013223:1349000:1357798135779813592401443Desulfohalobium retbaense DSM 5692, complete genomeAAA ATPase2e-82306
NC_016613:2759908:2782907278290727842141308Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein6e-66251
NC_003551:659236:6721516721516739081758Methanopyrus kandleri AV19, complete genomePredicted AAA+ class ATPase with chaperone activity9e-40164
NC_015216:2213427:2213427221342722150221596Methanobacterium sp. AL-21 chromosome, complete genomeAAA ATPase4e-36152
NC_015711:4319648:432667143266714326970300Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-1273.9