Pre_GI: BLASTP Hits

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Query: NC_016445:1363831:1399821 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 1399821, End: 1400330, Length: 510

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016513:1761830:176971917697191770126408Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative tripartite ATP-independent periplasmic transporter, DctQ component1e-0652.8
NC_015145:92397:121083121083121694612Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeTRAP-type C4-dicarboxylate transporter, small permease7e-0753.1
NC_013855:558831:5716875716875735791893Azospirillum sp. B510 plasmid pAB510a, complete sequenceTRAP C4-dicarboxylate transport system permease DctM subunit5e-0857
NC_004463:2344128:2345192234519223470841893Bradyrhizobium japonicum USDA 110, complete genomeprobable ABC transporter permease protein2e-0755.1
NC_017249:7917586:7935099793509979368981800Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0755.1
NC_017082:3717939:3719614371961437215091896Bradyrhizobium sp. S23321, complete genomeputative TRAP-type C4-dicarboxylate transport system1e-1065.9
NC_007503:1111457:116032211603221160825504Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctQ subunit5e-0960.5
NC_020302:85821:130639130639131205567Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein7e-1476.6
NC_015914:2230076:225333822533382253799462Cyclobacterium marinum DSM 745 chromosome, complete genomeTripartite ATP-independent periplasmic transporter DctQ component4e-0650.8
NC_013223:2609697:263816726381672638694528Desulfohalobium retbaense DSM 5692, complete genomeTripartite ATP-independent periplasmic transporter DctQ component2e-0651.6
NC_015573:162000:173262173262173816555Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTripartite ATP-independent periplasmic transporter DctQ component2e-0755.1
NC_014624:2668157:271831627183162718933618Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-0651.2
NC_014532:2989185:300195530019553002422468Halomonas elongata DSM 2581, complete genomeTRAP transporter small transmembrane protein8e-0753.1
NC_014323:4355266:4370785437078543726681884Herbaspirillum seropedicae SmR1 chromosome, complete genomeTRAP-type C4-dicarboxylate transport system dctQ-M fusion permease large permease6e-0960.1
NC_011894:3161289:3176689317668931785871899Methylobacterium nodulans ORS 2060, complete genomeTRAP C4-dicarboxylate transport system permease DctM subunit9e-0959.7
NC_004193:3530000:354022835402283540734507Oceanobacillus iheyensis HTE831, complete genomeC4-dicarboxylate transport system permease small protein4e-0650.8
NC_020911:18500:372623726237783522Octadecabacter antarcticus 307, complete genomeTRAP transporter small permease subunit DctQ2e-0652
NC_020908:1920169:193119919311991931687489Octadecabacter arcticus 238, complete genomeputative TRAP transporter DctQ component4e-0857.4
NC_014364:4488875:451039345103934510887495Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeTripartite ATP-independent periplasmic transporter DctQ component1e-0652.8
NC_017270:1755552:176717217671721767681510Vibrio cholerae LMA3984-4 chromosome chromosome I, completeTRAP-type transport system, small permeasetransporter3e-93340
NC_012578:1838470:187555418755541876075522Vibrio cholerae M66-2 chromosome I, complete sequenceSialic acid TRAP transporter small permease3e-93340
NC_012668:1688500:171856617185661719087522Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP-type transport system small permease component3e-93340
NC_009457:1444449:148152414815241482045522Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein3e-93340
NC_014041:3197192:320268832026883203158471Zunongwangia profunda SM-A87 chromosome, complete genomemembrane protein6e-1270.1