Query: NC_015957:3342169 Streptomyces violaceusniger Tu 4113 chromosome, complete genome
Start: 3342169, End: 3360975, Length: 18807
Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015514:3307199 | 3307199 | 3344647 | 37449 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 4e-82 | 313 | BLASTN svg | BLASTP svg |
NC_013235:3913000 | 3913000 | 3932224 | 19225 | Nakamurella multipartita DSM 44233, complete genome | 5e-41 | 176 | BLASTN svg | BLASTP svg |
NC_013235:4091185 | 4091185 | 4111646 | 20462 | Nakamurella multipartita DSM 44233, complete genome | 8e-40 | 172 | BLASTN svg | BLASTP svg |
NC_015859:370500 | 370500 | 389321 | 18822 | Corynebacterium variabile DSM 44702 chromosome, complete genome | 8e-34 | 153 | BLASTN svg | BLASTP svg |
NC_014210:2747787 | 2747787 | 2773405 | 25619 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 7e-28 | 133 | BLASTN svg | BLASTP svg |
NC_015514:3351052* | 3351052 | 3381530 | 30479 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 4e-23 | 117 | BLASTN svg | BLASTP svg |
NC_015683:947048* | 947048 | 968463 | 21416 | Corynebacterium ulcerans BR-AD22 chromosome, complete genome | 4e-20 | 107 | BLASTN svg | BLASTP svg |
NC_013501:777947 | 777947 | 803731 | 25785 | Rhodothermus marinus DSM 4252, complete genome | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_014329:844622* | 844622 | 889802 | 45181 | Corynebacterium pseudotuberculosis FRC41 chromosome, complete | 2e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_014318:6395392 | 6395392 | 6463099 | 67708 | Amycolatopsis mediterranei U32 chromosome, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
NC_010571:3903500 | 3903500 | 3921733 | 18234 | Opitutus terrae PB90-1, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
NC_003155:6444500 | 6444500 | 6466717 | 22218 | Streptomyces avermitilis MA-4680, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
NC_008541:2063218 | 2063218 | 2084059 | 20842 | Arthrobacter sp. FB24 chromosome 1, complete sequence | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_014210:4831858* | 4831858 | 4854224 | 22367 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_021177:7159654 | 7159654 | 7182788 | 23135 | Streptomyces fulvissimus DSM 40593, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009664:4423829* | 4423829 | 4686013 | 262185 | Kineococcus radiotolerans SRS30216, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_010994:4071131* | 4071131 | 4094246 | 23116 | Rhizobium etli CIAT 652, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013093:1036772* | 1036772 | 1087599 | 50828 | Actinosynnema mirum DSM 43827, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013595:6831480 | 6831480 | 6854143 | 22664 | Streptosporangium roseum DSM 43021, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008278:2732890* | 2732890 | 2785591 | 52702 | Frankia alni ACN14a, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013521:107937 | 107937 | 129437 | 21501 | Sanguibacter keddieii DSM 10542, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_008010:222516 | 222516 | 246365 | 23850 | Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_007348:752692 | 752692 | 777451 | 24760 | Ralstonia eutropha JMP134 chromosome 2, complete sequence | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_006087:28490* | 28490 | 75671 | 47182 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |