Pre_GI: BLASTN Hits

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Query: NC_015947:2360592 Burkholderia sp. JV3 chromosome, complete genome

Start: 2360592, End: 2382315, Length: 21724

Host Lineage: Stenotrophomonas maltophilia; Stenotrophomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Environment: Rhizosphere, Host, Rhizosphere-colonizing; Temp: Mesophile. This species is an uncommon but serious source of infection in patients with breathing tubes such as endotracheal or tracheostomy tubes, or with chronically indwelling urinary catheters. Although the organism can colonize the devices without causing an infection, under certain conditions it can cause pneumonia, urinary tract infections, or an infection of the blood. This organism can also cause infection in immunocompromised patients. It has resistance to many commonly used antibiotics and therefore is often difficult to eradicate. Most strains are resistant to co-trimoxazole.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011071:42358304235830426191326084Stenotrophomonas maltophilia R551-3, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015947:41968004196800422059923800Burkholderia sp. JV3 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010943:44766544476654449856421911Stenotrophomonas maltophilia K279a, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010943:28158652815865283809922235Stenotrophomonas maltophilia K279a, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010552:19645719645721578619330Burkholderia ambifaria MC40-6 chromosome 2, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_012660:41494874149487417527325787Pseudomonas fluorescens SBW25 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013440:5509790*5509790553637126582Haliangium ochraceum DSM 14365, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014100:1144463*1144463117100626544Caulobacter segnis ATCC 21756 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011757:4030346*4030346406130430959Methylobacterium chloromethanicum CM4, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010717:4851000*4851000487555824559Xanthomonas oryzae pv. oryzae PXO99A, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010172:57304657304660029627251Methylobacterium extorquens PA1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007086:557789*55778958514427356Xanthomonas campestris pv. campestris str. 8004, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003902:555699*55569958306027362Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0661.9BLASTN svgBLASTP svg