Pre_GI: BLASTP Hits

Some Help

Query: NC_015571:801715:822935 Porphyromonas gingivalis TDC60, complete genome

Start: 822935, End: 823603, Length: 669

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012793:3275751:328130832813083282021714Geobacillus sp. WCH70, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 13e-0652
NC_002950:1571383:158774915877491587910162Porphyromonas gingivalis W83, complete genomehypothetical protein2e-1892.4
NC_002950:1571383:158683115868311587499669Porphyromonas gingivalis W83, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 1 family protein7e-123439