Pre_GI: BLASTP Hits

Some Help

Query: NC_015224:2701914:2702534 Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,

Start: 2702534, End: 2703796, Length: 1263

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2695977:2695977269597726972841308Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein0843
NC_009801:3013838:3038216303821630394781263Escherichia coli E24377A, complete genomeYgbK domain protein2e-145515
NC_013850:2846069:2844811284481128460761266Klebsiella variicola At-22 chromosome, complete genometype III effector Hrp-dependent outers4e-142504
NC_016863:2974333:3027937302793730291991263Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative tRNA synthase5e-141501
NC_016856:3026426:3079685307968530809471263Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tRNA synthase5e-141501
NC_003197:3005842:3059448305944830607101263Salmonella typhimurium LT2, complete genomeputative tRNA synthase9e-141500
NC_016810:3028421:3082009308200930832711263Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-141500
NC_016857:3028421:3082009308200930832711263Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative tRNA synthase9e-141500
NC_016860:3029272:3082878308287830841401263Salmonella enterica subsp. enterica serovar Typhimurium strputative tRNA synthase9e-141500
NC_011283:2836000:2854876285487628561411266Klebsiella pneumoniae 342 chromosome, complete genomeYgbK domain protein1e-140499
NC_011283:2836000:2837948283794828392131266Klebsiella pneumoniae 342 chromosome, complete genomeYgbK domain protein1e-140499
NC_008570:1143578:1144203114420311454531251Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeYgbK domain protein6e-131467
NC_016513:317197:3222633222633235101248Aggregatibacter actinomycetemcomitans ANH9381 chromosome, complete4-hydroxy-3-methylbut-2-enyl diphosphate reductase4e-119428
NC_013416:16493:1994819948211921245Aggregatibacter actinomycetemcomitans D11S-1, complete genome4-hydroxy-3-methylbut-2-enyl diphosphate reductase1e-118426
NC_016633:1353458:1373959137395913751941236Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomehypothetical protein1e-104380
NC_015727:1050500:1060912106091210622131302Cupriavidus necator N-1 plasmid BB1p, complete sequencehypothetical protein9e-87320
NC_009664:4423829:4522632452263245241671536Kineococcus radiotolerans SRS30216, complete genometype III effector Hrp-dependent outers8e-70264
NC_014364:3500041:3524744352474435260181275Spirochaeta smaragdinae DSM 11293 chromosome, complete genometype III effector Hrp-dependent outer protein2e-68259
NC_010104:1096081:1098710109871010999691260Brucella canis ATCC 23365 chromosome II, complete sequencehypothetical protein1e-42174
NC_004311:1096649:1099278109927811005371260Brucella suis 1330 chromosome II, complete sequencehypothetical protein1e-42174
NC_015858:1150446:1153075115307511543341260Brucella pinnipedialis B2/94 chromosome chromosome 2, completehypothetical protein2e-42173
NC_013118:1109610:1112239111223911134981260Brucella microti CCM 4915 chromosome 2, complete genomehypothetical protein2e-42173
NC_010167:1085106:1087735108773510889941260Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein1e-41171
NC_003318:183914:1988721988722001281257Brucella melitensis 16M chromosome II, complete sequenceHypothetical Cytosolic Protein5e-40165
NC_009328:3322802:3342308334230833436001293Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein5e-36152
NC_007503:1111457:1121419112141911227171299Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein2e-28127
NC_020291:4305521:4315519431551943168111293Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein4e-28126
NC_010321:1703000:1709983170998317112421260Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeHrp-dependent type III effector protein5e-25115
NC_014964:1695000:1702196170219617034551260Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completetype III effector Hrp-dependent outer domain-containing protein5e-25115
NC_006582:4256915:4259615425961542609521338Bacillus clausii KSM-K16, complete genomehypothetical protein5e-23108
NC_011894:2503639:2502266250226625036421377Methylobacterium nodulans ORS 2060, complete genometype III effector Hrp-dependent outers2e-22107
NC_013406:347995:3631693631693644641296Paenibacillus sp. Y412MC10 chromosome, complete genometype III effector Hrp-dependent outers3e-22106
NC_019978:1182056:1193315119331511946161302Halobacteroides halobius DSM 5150, complete genomehypothetical protein2e-21103
NC_016023:1874827:1889733188973318910581326Bacillus coagulans 36D1 chromosome, complete genometype III effector Hrp-dependent outer protein2e-21103
NC_020210:3341976:3364747336474733660691323Geobacillus sp. GHH01, complete genomeDUF1537 family protein2e-20100
NC_011959:131800:1368301368301381551326Thermomicrobium roseum DSM 5159, complete genomeygbK domain protein8e-1995.1
NC_007624:1046500:104925710492571050081825Brucella melitensis biovar Abortus 2308 chromosome II, complete4e-1893.2
NC_006933:1051873:1054502105450210557261225Brucella abortus biovar 1 str. 9-941 chromosome II, complete5e-1892.4
NC_007963:3574000:3585560358556035868881329Chromohalobacter salexigens DSM 3043, complete genometype III effector Hrp-dependent outers1e-1791.3
NC_010552:2454776:2467655246765524690641410Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype III effector Hrp-dependent outer2e-1790.5
NC_017986:4790482:4799644479964448010351392Pseudomonas putida ND6 chromosome, complete genometype III effector Hrp-dependent outer3e-1686.7
NC_009512:2108686:2117851211785121192421392Pseudomonas putida F1, complete genometype III effector Hrp-dependent outer3e-1686.7
NC_014837:809911:8299778299778312481272Pantoea sp. At-9b chromosome, complete genometype III effector Hrp-dependent outer domain-containing protein5e-1582.8
NC_012791:2052923:2081805208180520831691365Variovorax paradoxus S110 chromosome 1, complete genometype III effector Hrp-dependent outers1e-1378.2
NC_007624:1046500:104971210497121050542831Brucella melitensis biovar Abortus 2308 chromosome II, complete1e-1274.7
NC_010740:1051000:105421410542141055044831Brucella abortus S19 chromosome 2, complete sequenceHypothetical Cytosolic Protein1e-1274.7
NC_006300:60484:6551765517667731257Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein3e-1273.2
NC_013526:567500:5684695684695696141146Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genometype III effector Hrp-dependent outers2e-1170.9
NC_014500:4049384:4067052406705240683081257Dickeya dadantii 3937 chromosome, complete genomeputative inner membrane protein2e-1170.9
NC_013967:1967896:1975149197514919763871239Haloferax volcanii DS2 chromosome, complete genomeygbK domain protein1e-0964.3
NC_009922:2721343:2749127274912727504491323Alkaliphilus oremlandii OhILAs, complete genometype III effector Hrp-dependent outers5e-0962.8