Pre_GI: BLASTP Hits

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Query: NC_013716:5141269:5142517 Citrobacter rodentium ICC168, complete genome

Start: 5142517, End: 5142819, Length: 303

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011750:5045927:504814350481435048490348Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-34142
NC_010634:635362:656272656272656604333Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein9e-0648.9