Pre_GI: BLASTP Hits

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Query: NC_013716:4306695:4351349 Citrobacter rodentium ICC168, complete genome

Start: 4351349, End: 4351870, Length: 522

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010498:3988351:399828039982803998702423Escherichia coli SMS-3-5, complete genomeputative fimbrial protein FanG2e-39161
NC_015761:2373967:238324123832412383762522Salmonella bongori NCTC 12419, complete genomeFimbrial subunit6e-1683.6
NC_015761:2373967:238272823827282383231504Salmonella bongori NCTC 12419, complete genomeFimbrial subunit6e-1167
NC_015761:2373967:238221523822152382703489Salmonella bongori NCTC 12419, complete genomeFimbrial subunit2e-0755.1