Pre_GI: BLASTP Hits

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Query: NC_013198:298000:301665 Lactobacillus rhamnosus GG, complete genome

Start: 301665, End: 302402, Length: 738

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:282901:283702283702284439738Lactobacillus rhamnosus Lc 705, complete genomeconserved hypothetical protein (integral membrane protein by homology)4e-140496
NC_010999:252605:252605252605253363759Lactobacillus casei, complete genomePredicted integral membrane protein5e-115413
NC_008526:250000:253256253256253999744Lactobacillus casei ATCC 334, complete genomePredicted integral membrane protein5e-115413
NC_014334:267409:270184270184270927744Lactobacillus casei str. Zhang chromosome, complete genomeputative integral membrane protein1e-114412
NC_007929:165518:183230183230183994765Lactobacillus salivarius subsp. salivarius UCC118, complete genomeIntegral membrane protein5e-1271.6
NC_008527:125723:146489146489147178690Lactococcus lactis subsp. cremoris SK11, complete genomePredicted integral membrane protein5e-0651.6