Pre_GI: BLASTP Hits

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Query: NC_012917:3684840:3688765 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3688765, End: 3689031, Length: 267

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:833721:837185837185837451267Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein7e-43172
NC_009778:567000:595496595496595762267Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-1475.9
NC_020211:996497:101072110107211010984264Serratia marcescens WW4, complete genomehypothetical protein4e-1167
NC_020211:103371:103559103559103822264Serratia marcescens WW4, complete genomehypothetical protein6e-1166.2