Pre_GI: BLASTP Hits

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Query: NC_012917:2971702:2987915 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2987915, End: 2988133, Length: 219

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:2004088:200850320085032008721219Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-31134
NC_009381:775357:807823807823808035213Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-2097.4
NC_010424:531727:544580544580544792213Candidatus Desulforudis audaxviator MP104C, complete genomehypothetical protein3e-1167.4
NC_020829:2152000:216292921629292163138210Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein3e-1063.5
NC_014011:962474:970479970479970691213Aminobacterium colombiense DSM 12261 chromosome, complete genomehypothetical protein2e-0858.2
NC_020541:2769419:278511427851142785323210Rhodanobacter sp. 2APBS1, complete genomehypothetical protein7e-0856.2
NC_016616:915755:922822922822923034213Dechlorosoma suillum PS chromosome, complete genomehypothetical protein1e-0652
NC_020409:2222000:223436122343612234570210Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein2e-0651.2
NC_015138:4205986:422113342211334221345213Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein2e-0651.2
NC_007510:1959883:196870019687001968906207Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein3e-0650.4
NC_011071:1877500:188469218846921884904213Stenotrophomonas maltophilia R551-3, complete genomehypothetical protein6e-0649.7