Pre_GI: BLASTP Hits

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Query: NC_012917:2921932:2949206 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2949206, End: 2950501, Length: 1296

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:3023762:3057133305713330584581326Dickeya dadantii 3937 chromosome, complete genomeflagellar hook-length control protein fliK5e-48192
NC_008800:2695977:2736550273655027377761227Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar hook-length control protein FliK3e-40166
NC_012880:1765920:1827337182733718289081572Dickeya dadantii Ech703, complete genomeflagellar hook-length control protein8e-38158
NC_014837:2586870:2607976260797626092621287Pantoea sp. At-9b chromosome, complete genomeflagellar hook-length control protein1e-33144
NC_014562:1844268:1870812187081218720801269Pantoea vagans C9-1 chromosome, complete genomeProbable flagellar hook-length control protein1e-32141
NC_016816:1912366:1912366191236619136341269Pantoea ananatis LMG 5342, complete genomeflagellar hook-length control protein FliK1e-30134
NC_007912:2768363:2770177277017727716341458Saccharophagus degradans 2-40, complete genomeFlagellar hook-length control protein-like3e-1376.6
NC_009654:3849774:3880391388039138820941704Marinomonas sp. MWYL1, complete genomeflagellar hook-length control protein4e-1169.7
NC_014366:1814000:1828799182879918310002202Gamma proteobacterium HdN1, complete genomeSimilar to flagellar hook-length control protein3e-1067
NC_019940:293476:2955582955582967661209Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar hook-length control protein3e-1066.6
NC_013851:3300278:3314118331411833157101593Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar hook-length control protein8e-0858.5
NC_016893:43234:6036960369616311263Wigglesworthia glossinidia endosymbiont of Glossina morsitansFliK family flagellar hook-length control protein1e-0654.7