Pre_GI: BLASTP Hits

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Query: NC_012854:1:11749 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505,

Start: 11749, End: 13344, Length: 1596

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host, Root nodule. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of Mediterranean origin used in farming, such as T. pratense, and is therefore one of the most important clover inoculants but is incompatible with American and African perennial clovers, such as those nodulated by the dissimilar strain WSM2304. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014152:421481:4401874401874418271641Thermincola sp. JR, complete genomehypothetical protein8e-36152
NC_014314:1148000:1159357115935711609131557Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein3e-34146
NC_010337:616304:6425506425506441301581Heliobacterium modesticaldum Ice1, complete genomehypothetical protein3e-31137
NC_014364:2111685:2123295212329521248361542Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein3e-30133
NC_015577:3244857:3255981325598132575491569Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein7e-29129
NC_014734:677103:6933416933416948941554Paludibacter propionicigenes WB4 chromosome, complete genomehypothetical protein9e-29128
NC_012918:356019:3676653676653691371473Geobacter sp. M21 chromosome, complete genomehypothetical protein4e-1893.6
NC_012854:1:1336513365149331569Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505,HSP90 family molecular chaperone-like protein4e-1790.1