Pre_GI: BLASTP Hits

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Query: NC_012660:5242392:5254736 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5254736, End: 5255449, Length: 714

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006138:2288261:231215223121522312865714Desulfotalea psychrophila LSv54, complete genome5-methylcytosine-specific restriction enzyme A5e-42171
NC_010002:3465509:347135734713573472349993Delftia acidovorans SPH-1, complete genomeHNH endonuclease8e-42170
NC_017098:986428:995168995168995860693Spirochaeta africana DSM 8902 chromosome, complete genomeputative restriction endonuclease1e-40166
AC_000091:1191353:121192312119231212756834Escherichia coli W3110 DNA, complete genome5-methylcytosine-specific restriction endonuclease B3e-29128
NC_000913:1188999:120956912095691210402834Escherichia coli K12, complete genomee14 prophage; 5-methylcytosine-specific restriction endonuclease B3e-29128
NC_019974:1184871:1248465124846512498831419Natronococcus occultus SP4, complete genomeputative restriction endonuclease2e-1996.3
NC_008826:13393:283812838129043663Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein1e-1893.2
NC_014965:2200974:221588722158872216594708Vibrio vulnificus MO6-24/O chromosome I, complete sequenceHNH endonuclease3e-1788.6
NC_011146:3206000:321961232196123220313702Geobacter bemidjiensis Bem, complete genomeHNH endonuclease2e-1685.9
NC_009337:89631:991649916499832669Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeHNH endonuclease2e-1582.4
NC_014253:312354:3248563248563262831428Methanohalobium evestigatum Z-7303 chromosome, complete genomeHNH endonuclease1e-1376.6
NC_015410:1202370:121125612112561211990735Pseudomonas mendocina NK-01 chromosome, complete genomeputative restriction endonuclease3e-1375.9
NC_020211:554736:5795815795815806991119Serratia marcescens WW4, complete genomehypothetical protein4e-1374.7
NC_012489:4336790:436408443640844364935852Gemmatimonas aurantiaca T-27, complete genomehypothetical protein2e-1273.2
NC_010571:1334000:133977913397791340618840Opitutus terrae PB90-1, complete genomeHNH endonuclease7e-1270.9
NC_016861:22256:3809738097392331137Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1169.7
NC_007492:5214709:522843452284345229405972Pseudomonas fluorescens PfO-1, complete genomeHNH endonuclease4e-1168.6
NC_012791:4794362:4816362481636248175041143Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein2e-0962.8
NC_003888:5042283:5052984505298450546661683Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0962.8
NC_008435:2658986:274394627439462744797852Rhodopseudomonas palustris BisA53, complete genomehypothetical protein2e-0962.8
NC_018080:2288700:230470923047092305695987Pseudomonas aeruginosa DK2 chromosome, complete genomeHNH endonuclease typeIV restriction enzyme4e-0961.6
NC_007494:1:717271728008837Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein7e-0960.8
NC_003911:2899435:289943528994352900271837Silicibacter pomeroyi DSS-3, complete genomehypothetical protein8e-0960.8
NC_015145:1045264:105254110525411052972432Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome2e-0859.7
NC_009050:567209:5829345829345839411008Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein2e-0859.3
NC_008358:2638245:2681872268187226829031032Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein3e-0858.9
NC_008209:2367500:236832323683232369162840Roseobacter denitrificans OCh 114, complete genomehypothetical protein3e-0858.9
NC_013521:302574:3175943175943187811188Sanguibacter keddieii DSM 10542, complete genomeHNH endonuclease3e-0858.9
NC_007510:943068:953591953591953959369Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein9e-0857
NC_008313:1:2243622436235511116Ralstonia eutropha H16 chromosome 1, complete sequencepredicted restriction endonuclease2e-0756.2
NC_007802:1991211:199931319993132000149837Jannaschia sp. CCS1, complete genomehypothetical protein5e-0754.7
NC_014306:1810548:181883218188321819554723Erwinia billingiae Eb661, complete genomepredicted endonuclease6e-0754.7
NC_008686:2080770:208318520831852084021837Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein2e-0653.1
NC_017506:1660072:1674490167449016759801491Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein2e-0652.8