Pre_GI: BLASTP Hits

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Query: NC_012560:3416451:3424243 Azotobacter vinelandii DJ, complete genome

Start: 3424243, End: 3425532, Length: 1290

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:3416450:3424242342424234255311290Azotobacter vinelandii CA6, complete genomeesterase, poly(3-hydroxybutyrate) depolymerase0850
NC_017249:3119000:3133550313355031347401191Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-98358
NC_004463:5540924:5540924554092455421141191Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein6e-97354
NC_015727:764744:7660787660787672681191Cupriavidus necator N-1 plasmid BB1p, complete sequencepoly(3-hydroxyalkanoate) depolymerase8e-83307
NC_018012:1076839:1082648108264810837541107Thiocystis violascens DSM 198 chromosome, complete genomeesterase, PHB depolymerase family7e-81301
NC_013757:1212308:1237229123722912384611233Geodermatophilus obscurus DSM 43160, complete genomeesterase, PHB depolymerase family2e-67256
NC_012808:1122341:112641111264111127316906Methylobacterium extorquens AM1, complete genomeEsterase, PHB depolymerase (C-terminal fragment)1e-66254
NC_016590:548312:5564955564955576371143Burkholderia sp. YI23 chromosome 3, complete sequenceesterase, poly(3-hydroxybutyrate) depolymerase8e-64244
NC_012721:2021885:2044340204434020453741035Burkholderia glumae BGR1 chromosome 2, complete genomePolyhydroxybutyrate depolymerase domain protein7e-29128
NC_008314:2686851:2711012271101227121091098Ralstonia eutropha H16 chromosome 2, complete sequencePoly(3-hydroxybutyrate) depolymerase1e-28127
NC_018681:867230:895793895793896755963Nocardia brasiliensis ATCC 700358 chromosome, complete genomeesterase, PHB depolymerase7e-24112
NC_010801:238430:2442422442422453661125Burkholderia multivorans ATCC 17616 chromosome 3, completepoly(3-hydroxybutyrate) depolymerase3e-23109
NC_015711:2050360:205346620534662054344879Myxococcus fulvus HW-1 chromosome, complete genomePHB depolymerase family esterase7e-23108
NC_008544:55451:7076770767720321266Burkholderia cenocepacia HI2424 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like protein3e-21103
NC_008062:81338:9294992949942141266Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencepoly(3-hydroxybutyrate) depolymerase-like3e-21103
NC_013159:3423500:344169934416993442694996Saccharomonospora viridis DSM 43017, complete genomeesterase, PHB depolymerase family1e-1791.3
NC_005070:1486496:1497424149742414986201197Synechococcus sp. WH 8102, complete genomehypothetical protein3e-0963.2