Pre_GI: BLASTP Hits

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Query: NC_012125:894955:899831 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 899831, End: 899965, Length: 135

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:944125:949001949001949135135Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-1787
NC_011080:924326:929202929202929336135Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-1787
NC_011083:967260:972136972136972270135Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-1787
NC_010102:2178594:219327321932732193407135Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1785.5
NC_016857:919266:924142924142924276135Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-1684.3
NC_016856:921057:925933925933926067135Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-1684.3
NC_016831:2108557:212327121232712123405135Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-1682.8