Pre_GI: BLASTP Hits

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Query: NC_012125:1632150:1640957 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1640957, End: 1641121, Length: 165

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:2235607:225209122520912252255165Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-25115
NC_004631:799810:808586808586808783198Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-25114
NC_003198:2179688:219515321951532195350198Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-25114
NC_016832:799764:808573808573808737165Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-25113
NC_011149:2179592:219516021951602195357198Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein7e-23105