Pre_GI: BLASTP Hits

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Query: NC_012125:1360593:1361900 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1361900, End: 1362076, Length: 177

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:2489000:250983825098382510065228Escherichia coli S88 chromosome, complete genomehypothetical protein2e-27120
NC_007946:2593500:261351526135152613742228Escherichia coli UTI89, complete genomehypothetical protein3e-27120
NC_013364:2612822:263106626310662631221156Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-22104