Pre_GI: BLASTP Hits

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Query: NC_011982:206784:218818 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 218818, End: 219702, Length: 885

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010511:7553703:757707675770767577624549Methylobacterium sp. 4-46 chromosome, complete genomeputative transposase2e-74278
NC_010125:381711:386781386781387335555Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein9e-65247
NC_010125:763141:769014769014769577564Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase9e-63240
NC_010125:1538335:156106115610611561591531Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase6e-57221
NC_010125:3067301:307983030798303080360531Gluconacetobacter diazotrophicus PAl 5, complete genometransposase7e-57221
NC_010125:3067301:307602930760293076559531Gluconacetobacter diazotrophicus PAl 5, complete genometransposase1e-56220
NC_016815:1543308:154814915481491548571423Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceUncharacterized protein y4pE/y4sA8e-56217
NC_016622:82418:858758587586711837Azospirillum lipoferum 4B, complete genome1e-55216
NC_013854:2148215:216578921657892166310522Azospirillum sp. B510, complete genometransposase5e-51201
NC_013854:3200912:320246232024623202983522Azospirillum sp. B510, complete genometransposase5e-51201
NC_016624:112919:125635125635126213579Azospirillum lipoferum 4B plasmid AZO_p5, complete sequence1e-48193
NC_006370:768745:786125786125786688564Photobacterium profundum SS9 chromosome 1, complete sequenceputative transposase3e-44179
NC_009524:1796000:179724817972481797793546Psychrobacter sp. PRwf-1 chromosome, complete genome4e-43175
NC_011420:2803196:281186828118682812605738Rhodospirillum centenum SW, complete genometransposase and inactivated derivative8e-42171
NC_010510:388885:406221406221406658438Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative transposase3e-37155
NC_011894:6382636:640135964013596401682324Methylobacterium nodulans ORS 2060, complete genomehypothetical protein5e-36151
NC_016587:523215:529247529247529681435Azospirillum lipoferum 4B plasmid AZO_p4, complete sequencetransposase of ISAli2, IS630 family. ORFB4e-35148
NC_016027:1851737:187345318734531873857405Gluconacetobacter xylinus NBRC 3288, complete genometransposase6e-31134
NC_010125:1538335:157560715756071575891285Gluconacetobacter diazotrophicus PAl 5, complete genome1e-30134
NC_007626:418067:439094439094439408315Magnetospirillum magneticum AMB-1, complete genomeHypothetical 155 kDa protein Y4PE/Y4SA4e-30132
NC_020908:4550414:456658745665874566910324Octadecabacter arcticus 238, complete genomehypothetical protein7e-27121
NC_009485:8187321:819909681990968199320225Bradyrhizobium sp. BTAi1 chromosome, complete genometransposase2e-25116
NC_015731:1381737:139996813999681400552585Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein2e-23110
NC_016027:123853:155435155435156013579Gluconacetobacter xylinus NBRC 3288, complete genometransposase2e-21103
NC_011892:352652:354561354561355065505Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete2e-21103
NC_006371:1997954:200608620060862006412327Photobacterium profundum SS9 chromosome 2, complete sequenceputative transposase4e-21102
NC_017059:2491924:249192424919242492226303Rhodospirillum photometricum DSM 122, complete genomeISSod10, transposase OrfB6e-2098.2
NC_011894:6382636:640073064007306401362633Methylobacterium nodulans ORS 2060, complete genome1e-1894
NC_016027:123853:123853123853124083231Gluconacetobacter xylinus NBRC 3288, complete genometransposase1e-1790.5
NC_015942:3090275:309785330978533098248396Acidithiobacillus ferrivorans SS3 chromosome, complete genometransposase family protein2e-1790.1
NC_010981:242500:293993293993294403411Wolbachia pipientis, complete genomePutative transposase (fragment)2e-1790.1
NC_011206:123791:136991136991137407417Acidithiobacillus ferrooxidans ATCC 53993, complete genometransposase family protein1e-1480.9
NC_014816:2357000:238806023880602388209150Asticcacaulis excentricus CB 48 chromosome 1, complete sequence2e-1376.6
NC_008639:1573971:157688415768841577390507Chlorobium phaeobacteroides DSM 266, complete genometransposase family protein2e-1376.3
NC_014032:2440656:245973224597322460274543Salinibacter ruber M8 chromosome, complete genometransposase5e-1375.1
NC_018721:2759700:277831627783162778816501Psychroflexus torquis ATCC 700755 chromosome, complete genometransposase, IS630/ISSod10 family, OrfB2e-1272.8
NC_007484:2045500:206554120655412065801261Nitrosococcus oceani ATCC 19707, complete genome5e-1168.6
NC_009925:2728203:274466827446682745222555Acaryochloris marina MBIC11017, complete genometransposase, putative2e-0963.2
NC_016027:194842:201142201142201360219Gluconacetobacter xylinus NBRC 3288, complete genometransposase2e-0757
NC_018012:1628364:1639251163925116402761026Thiocystis violascens DSM 198 chromosome, complete genometransposase5e-0755.1
NC_015161:36668:4282342823461953373Deinococcus proteolyticus MRP chromosome, complete genome6e-0755.1
NC_016027:194842:201422201422201709288Gluconacetobacter xylinus NBRC 3288, complete genometransposase2e-0653.5
NC_004369:371109:3711093711093721431035Corynebacterium efficiens YS-314, complete genomeputative transposase3e-0652.8