Pre_GI: BLASTP Hits

Some Help

Query: NC_011593:2288993:2319093 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 2319093, End: 2320628, Length: 1536

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:2292040:2318911231891123204461536Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein0936
NC_013714:2086526:2096552209655220980871536Bifidobacterium dentium Bd1, complete genomeputative flippase0785
NC_018720:2097694:2106452210645221079841533Bifidobacterium asteroides PRL2011 chromosome, complete genomepolysaccharide biosynthesis protein7e-135481
NC_013714:2086526:2089561208956120910901530Bifidobacterium dentium Bd1, complete genomeHypothetical transmembrane protein possibly involved in polysaccharide biosynthesis4e-134478
NC_009615:3904962:3918369391836939198591491Parabacteroides distasonis ATCC 8503 chromosome, complete genomeflippase8e-62238
NC_013410:2519441:2539481253948125410101530Fibrobacter succinogenes subsp. succinogenes S85 chromosome,polysaccharide biosynthesis protein1e-51204
NC_017068:638868:6529166529166544331518Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-37157
NC_011832:820658:8490678490678506351569Candidatus Methanosphaerula palustris E1-9c, complete genomepolysaccharide biosynthesis protein4e-27123
NC_011832:366092:3851003851003866591560Candidatus Methanosphaerula palustris E1-9c, complete genomepolysaccharide biosynthesis protein8e-27122
NC_008942:875060:8829498829498845171569Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-24114
NC_009051:930758:9357359357359372791545Methanoculleus marisnigri JR1, complete genomepolysaccharide biosynthesis protein5e-21102
NC_008553:1038344:1042374104237410439271554Methanosaeta thermophila PT, complete genomepolysaccharide biosynthesis protein6e-2099.4
NC_007498:2087811:2105832210583221073521521Pelobacter carbinolicus DSM 2380, complete genomeO-antigen and teichoic acid export protein4e-1893.2
NC_010172:3946644:3952432395243239540361605Methylobacterium extorquens PA1, complete genomepolysaccharide biosynthesis protein2e-1791.3
NC_014972:322056:3594283594283606421215Desulfobulbus propionicus DSM 2032 chromosome, complete genomepolysaccharide biosynthesis protein6e-0962.8
NC_018679:3197347:3203529320352932050161488Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative O-antigen and teichonic acid transporter4e-0756.6
NC_006347:3166000:3189164318916431906991536Bacteroides fragilis YCH46, complete genomeputative flippase8e-0652.4