Pre_GI: BLASTP Hits

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Query: NC_011149:1987291:1989050 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1989050, End: 1989214, Length: 165

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:1166271:118320911832091183373165Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-25112
NC_011083:1216500:122925112292511229415165Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-25112
NC_016857:1163919:118104211810421181206165Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein4e-24109
NC_016856:1165941:118306411830641183228165Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-24109
NC_016831:947281:988666988666988830165Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-24109
NC_011205:2137696:214193121419312142095165Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-24109
NC_011080:1209935:122668912266891226853165Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein4e-24109
NC_016832:1838220:184287618428761843040165Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-23105
NC_010067:1782998:178677117867711786935165Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-22102