Pre_GI: BLASTP Hits

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Query: NC_011149:1077589:1085511 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1085511, End: 1086170, Length: 660

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:1284579:128985912898591290545687Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-91335
NC_011601:1114104:111937411193741120060687Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein9e-90329
NC_013364:1257801:126309012630901263767678Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-89328
NC_010554:2789722:280583728058372806076240Proteus mirabilis HI4320, complete genomehypothetical protein3e-1478.2