Pre_GI: BLASTP Hits

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Query: NC_011092:76993:87088 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 87088, End: 88002, Length: 915

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006856:26438:330923309233997906Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein7e-173606
NC_015567:346500:382544382544383377834Serratia sp. AS9 chromosome, complete genomeBetR domain-containing protein6e-79294
NC_015566:345084:382358382358383191834Serratia sp. AS12 chromosome, complete genomeBetR domain-containing protein6e-79294
NC_009832:4482500:449175344917534492586834Serratia proteamaculans 568, complete genomeresponse regulator receiver protein4e-75281
NC_015566:5197624:521494652149465215797852Serratia sp. AS12 chromosome, complete genomeBetR domain-containing protein4e-32138
NC_009832:5214850:523300352330035233854852Serratia proteamaculans 568, complete genomeresponse regulator receiver protein1e-30134
NC_007511:1300978:130439413043941305248855Burkholderia sp. 383 chromosome 2, complete sequenceresponse regulator receiver domain protein (CheY-like)3e-25115
NC_015377:34445:450344503445903870Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequenceresponse regulator receiver protein7e-24111
NC_006350:845513:847843847843848805963Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative two-component transcriptional response regulator8e-2097.8
NC_007434:1001514:100531610053161006191876Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative two-component transcriptional response regulator1e-1997.4
NC_009076:779407:7831717831717843671197Burkholderia pseudomallei 1106a chromosome I, complete sequenceresponse regulator1e-1997.4
NC_010552:196457:214911214911215786876Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceresponse regulator receiver protein2e-1893.2
NC_010694:1250841:126378312637831264559777Erwinia tasmaniensis, complete genomeResponse regulator receiver2e-1170.1
NC_012214:1355500:137101413710141371790777Erwinia pyrifoliae Ep1/96, complete genomeResponse regulator receiver4e-1065.5
NC_014305:126029:135008135008135778771Erwinia billingiae Eb661 plasmid pEB170, complete sequenceResponse regulator receiver1e-0653.9