Pre_GI: BLASTP Hits

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Query: NC_011083:4547825:4563134 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 4563134, End: 4563397, Length: 264

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012912:2285778:230426723042672304530264Dickeya zeae Ech1591, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family5e-32136
NC_016147:1672482:168567616856761685924249Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein2e-1994.4
NC_008687:965152:967468967468967713246Paracoccus denitrificans PD1222 chromosome 2, complete sequenceputative transcriptional regulators, CopG/Arc/MetJ family2e-1064.3
NC_010725:5491491:550561555056155505860246Methylobacterium populi BJ001, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family3e-1063.9
NC_015675:1721543:173474417347441735010267Mesorhizobium opportunistum WSM2075 chromosome, complete genomeputative CopG/Arc/MetJ family addiction module antidote protein7e-1062.4
NC_010831:1224000:125019012501901250441252Chlorobium phaeobacteroides BS1, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family3e-0960.5
NC_002678:2739829:275240027524002752666267Mesorhizobium loti MAFF303099, complete genomehypothetical protein7e-0959.3
NC_007645:4677965:468171346817134681967255Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator containing the CopG/Arc/MetJ DNA-binding domain8e-0958.9
NC_017269:303500:303836303836304078243Vibrio cholerae LMA3984-4 chromosome II, complete sequencetranscriptional regulator5e-0856.6
NC_016446:49618:749917499175233243Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein9e-0855.5
NC_016945:324519:349742349742349984243Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein9e-0855.5
NC_014923:1680095:169337816933781693644267Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeaddiction module antidote protein, CC2985 family2e-0755.1
NC_007492:3462929:350343535034353503725291Pseudomonas fluorescens PfO-1, complete genomePredicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain3e-0753.9
NC_010814:2758902:277273727727372772979243Geobacter lovleyi SZ, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family4e-0753.1
NC_014315:2711852:272561627256162725864249Nitrosococcus watsoni C-113 chromosome, complete genomeputative addiction module antidote protein7e-0752.8
NC_004459:2443000:257061225706122570854243Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator1e-0652
NC_014965:1428902:154914115491411549383243Vibrio vulnificus MO6-24/O chromosome I, complete sequencetranscriptional regulator1e-0652
NC_013037:1587673:159648015964801596725246Dyadobacter fermentans DSM 18053, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family1e-0651.6
NC_009656:4527457:465207146520714652343273Pseudomonas aeruginosa PA7 chromosome, complete genomeaddiction module antidote family protein5e-0650.1
NC_018080:5091772:517769951776995177971273Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein5e-0649.7
NC_008463:5313527:534646453464645346736273Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-0649.7