Pre_GI: BLASTP Hits

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Query: NC_010673:113133:130843 Borrelia hermsii DAH, complete genome

Start: 130843, End: 131787, Length: 945

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014484:1163576:119778111977811198716936Spirochaeta thermophila DSM 6192 chromosome, complete genomeTPR domain-containing protein4e-46185
NC_000919:12545:184041840419351948Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein5e-46185
NC_010741:12542:184011840119348948Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein5e-46185
NC_016842:1:184091840919356948Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeTPR domain-containing protein5e-46185
NC_016843:1:184091840919356948Treponema pallidum subsp. pertenue str. Gauthier chromosome,TPR domain-containing protein5e-46185
NC_016844:12545:184061840619353948Treponema pallidum subsp. pallidum DAL-1 chromosome, completehypothetical protein5e-46185
NC_016848:12548:184091840919356948Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeTPR domain-containing protein5e-46185
NC_017268:1:184071840719354948Treponema pallidum subsp. pallidum str. Chicago chromosome,TPR domain-containing protein5e-46185
NC_021508:12543:184041840419351948Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein5e-46185
NC_019908:1296870:131021413102141311194981Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein4e-1168.9
NC_014330:1957725:195772519577251958705981Brachyspira pilosicoli 95/1000 chromosome, complete genomeTPR domain-containing protein4e-1168.9