Some Help

Query: NC_010612:4400260 Mycobacterium marinum M, complete genome

Start: 4400260, End: 4423267, Length: 23008

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010612:46795944679594471951939926Mycobacterium marinum M, complete genome1e-60242BLASTN svgBLASTP svg
NC_010612:4501414*4501414452499223579Mycobacterium marinum M, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009525:2635792*2635792265864122850Mycobacterium tuberculosis H37Ra, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010397:18027241802724184373441011Mycobacterium abscessus chromosome Chromosome, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_006361:17200311720031174529925269Nocardia farcinica IFM 10152, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014168:28203152820315284681226498Segniliparus rotundus DSM 44985 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg