Pre_GI: BLASTP Hits

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Query: NC_010572:33724:34981 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 34981, End: 35865, Length: 885

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:8493946:851006585100658510949885Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein8e-137486
NC_003903:167825:1929441929441969544011Streptomyces coelicolor A3(2) plasmid SCP1, complete sequencehypothetical protein4e-63241
NC_016111:581143:5911615911615951804020Streptomyces cattleya NRRL 8057, complete genomehypothetical protein3e-1892.4
NC_013093:4522751:4543461454346145470963636Actinosynnema mirum DSM 43827, complete genomeprotein of unknown function DUF3128e-1374.7
NC_019673:2051363:210655921065592107389831Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1273.2
NC_013093:4522751:4548399454839945525744176Actinosynnema mirum DSM 43827, complete genomemethyl-accepting chemotaxis sensory transducer7e-0961.2
NC_009953:3852436:3858662385866238629424281Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein2e-0860.1
NC_009380:3563421:3570278357027835744054128Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein2e-0756.6