Pre_GI: BLASTP Hits

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Query: NC_010572:1872840:1877109 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 1877109, End: 1881785, Length: 4677

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:7337453:7348537734853773532104674Streptomyces coelicolor A3(2), complete genomeprotein kinase02109
NC_016887:1949927:1989157198915719936414485Nocardia cyriacigeorgica GUH-2, complete genomeputative serine/threonine protein kinase01518
NC_014666:6940532:6951904695190469566554752Frankia sp. EuI1c chromosome, complete genomeserine/threonine protein kinase0736
NC_013159:502928:5080035080035122294227Saccharomonospora viridis DSM 43017, complete genomenuclease-like protein3e-151537
NC_009142:5698100:5727827572782757317533927Saccharopolyspora erythraea NRRL 2338, complete genomeserine/threonine protein kinase1e-139498
NC_007333:810381:8103818103818146464266Thermobifida fusca YX, complete genomeTyrosine protein kinase:Serine/threonine protein kinase6e-131469
NC_014391:1317957:1329830132983013339394110Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNERD domain-containing protein1e-119432
NC_007651:72952:1319181319181361204203Burkholderia thailandensis E264 chromosome I, complete sequenceProtein kinase domain protein4e-110400
NC_007645:3581114:3602720360272036068774158Hahella chejuensis KCTC 2396, complete genomeSerine/threonine protein kinase2e-100368
NC_009338:3359500:3400244340024434044614218Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotein kinase8e-82306
NC_010162:10676864:1067686410676864106812974434Sorangium cellulosum 'So ce 56', complete genomeprotein kinase5e-72273
NC_015859:1898693:1913373191337319173804008Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein3e-31138
NC_014394:707305:7182267182267231904965Gallionella capsiferriformans ES-2 chromosome, complete genomeNERD domain-containing protein2e-1275.9
NC_012731:600518:6093686093686143234956Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-1173.9
NC_012779:346998:3701113701113750724962Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-0966.6
NC_012691:2097287:2102959210295921079294971Tolumonas auensis DSM 9187, complete genomeNERD domain protein6e-0861.2
NC_006370:1810842:1818063181806318230244962Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein2e-0759.7
NC_016943:21364:4027640276422011926Blastococcus saxobsidens DD2, complete genomeTwo component serine/threonine-protein kinase with PASTA sensors4e-0655.1
NC_013757:21245:3998439984419271944Geodermatophilus obscurus DSM 43160, complete genomeserine/threonine protein kinase with PASTA sensor(s)9e-0653.9