Pre_GI: BLASTP Hits

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Query: NC_010102:1779707:1783549 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1783549, End: 1783707, Length: 159

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1182496:120465012046501204808159Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-23106
NC_011094:1282385:130519813051981305356159Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein6e-23106
NC_016856:1326503:134850813485081348666159Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-22104
NC_011205:2024458:202830020283002028458159Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-22104