Pre_GI: BLASTP Hits

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Query: NC_010102:1616530:1638372 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1638372, End: 1638479, Length: 108

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016856:1481325:149341014934101493517108Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-1375.1
NC_016856:332771:352120352120352227108Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-1372.8
NC_016832:1880174:188220818822081882321114Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1270.9
NC_016856:1128715:114323011432301143337108Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-1270.9
NC_010102:2020762:202304620230462023153108Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1168.2