Pre_GI: BLASTP Hits

Some Help

Query: NC_010001:851671:873964 Clostridium phytofermentans ISDg, complete genome

Start: 873964, End: 874098, Length: 135

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011725:5169135:5186485518648551874951011Bacillus cereus B4264 chromosome, complete genomeUDP-glucose 4-epimerase1e-0962
NC_016593:3402205:3420091342009134211131023Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeUDP-galactose 4-epimerase3e-0960.8
NC_016771:4962795:4978365497836549793931029Bacillus cereus NC7401, complete genomeUDP-glucose 4-epimerase2e-0857.8
NC_011658:5007691:5026042502604250270701029Bacillus cereus AH187 chromosome, complete genomeUDP-glucose 4-epimerase2e-0857.8
NC_014829:3964616:3969589396958939705961008Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeUDP-glucose 4-epimerase2e-0857.8
NC_014206:3468500:3472104347210434731261023Geobacillus sp. C56-T3 chromosome, complete genomeUDP-glucose 4-epimerase3e-0857.4
NC_008435:1215437:1224242122424212252551014Rhodopseudomonas palustris BisA53, complete genomeUDP-glucose 4-epimerase3e-0857.4
NC_014935:1389000:1403030140303014040611032Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeudp-galactose 4-epimerase2e-0857.4
NC_012691:2225000:2244341224434122453541014Tolumonas auensis DSM 9187, complete genomeUDP-glucose 4-epimerase4e-0856.6
NC_014539:888562:9099229099229109471026Burkholderia sp. CCGE1003 chromosome 1, complete sequenceUDP-glucose 4-epimerase7e-0856.2
NC_003909:4951444:4967875496787549688911017Bacillus cereus ATCC 10987, complete genomeUDP-glucose 4-epimerase6e-0856.2
NC_016751:1299738:1302798130279813038111014Marinitoga piezophila KA3 chromosome, complete genomeUDP-glucose-4-epimerase7e-0855.8
NC_012914:6583000:6592464659246465934891026Paenibacillus sp. JDR-2, complete genomeUDP-glucose 4-epimerase7e-0855.8
NC_016603:3181592:3202754320275432037731020Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeUDP-glucose 4-epimerase9e-0855.5
NC_015581:1043394:1054738105473810558291092Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeUDP-glucose 4-epimerase1e-0755.5
NC_011565:750168:7526627526627536871026Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,UDP-glucose 4-epimerase2e-0754.7
NC_021171:4425050:4446614444661444476361023Bacillus sp. 1NLA3E, complete genomeUDP-galactose 4-epimerase2e-0754.7
NC_007298:1334876:1342602134260213436061005Dechloromonas aromatica RCB, complete genomeUDP-glucose 4-epimerase2e-0754.3
NC_007614:261588:2810912810912821521062Nitrosospira multiformis ATCC 25196 chromosome 1, completeUDP-glucose 4-epimerase4e-0753.5
NC_008253:2134110:2143890214389021448971008Escherichia coli 536, complete genomeUDP-glucose 4-epimerase5e-0753.1
NC_004431:2383901:2393682239368223946891008Escherichia coli CFT073, complete genomeUDP-glucose 4-epimerase5e-0753.1
CP002516:1846492:1860707186070718617141008Escherichia coli KO11, complete genomeUDP-glucose 4-epimerase5e-0753.1
CP002185:2233732:2244141224414122451481008Escherichia coli W, complete genomeputative UDP-glucosamine-4-epimerase5e-0753.1
NC_016902:1846492:1860707186070718617141008Escherichia coli KO11FL chromosome, complete genomeUDP-glucose 4-epimerase5e-0753.1
NC_015761:2062345:2070251207025120712761026Salmonella bongori NCTC 12419, complete genomeUDP-glucose 4-epimerase8e-0752.4
NC_010804:782222:8073588073588083801023Burkholderia multivorans ATCC 17616 chromosome 1, completeUDP-glucose 4-epimerase9e-0752.4
NC_006138:23902:2696226962279901029Desulfotalea psychrophila LSv54, complete genomeUDP-glucose 4-epimerase1e-0652
NC_009654:894492:9021899021899032021014Marinomonas sp. MWYL1, complete genomeUDP-glucose 4-epimerase1e-0652
NC_010508:933862:9580859580859591071023Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceUDP-glucose 4-epimerase1e-0652
NC_007498:2087811:2107718210771821087311014Pelobacter carbinolicus DSM 2380, complete genomeUDP-glucose 4-epimerase2e-0651.2
NC_016860:857500:8794098794098804251017Salmonella enterica subsp. enterica serovar Typhimurium strUDP-galactose-4-epimerase2e-0651.2
NC_015460:418826:4353214353214363371017Gallibacterium anatis UMN179 chromosome, complete genomeUDP-galactose-4-epimerase2e-0651.2
NC_014541:1165991:1192476119247611934921017Ferrimonas balearica DSM 9799 chromosome, complete genomeUDP-galactose 4-epimerase3e-0650.8
NC_013416:1091432:1091432109143210924481017Aggregatibacter actinomycetemcomitans D11S-1, complete genomeUDP-glucose 4-epimerase2e-0650.8
NC_009512:4375452:4389826438982643908361011Pseudomonas putida F1, complete genomeUDP-glucose 4-epimerase2e-0650.8
NC_007651:1662558:1683400168340016844221023Burkholderia thailandensis E264 chromosome I, complete sequenceUDP-glucose 4-epimerase2e-0650.8
NC_009524:263587:2676482676482687031056Psychrobacter sp. PRwf-1 chromosome, complete genomeUDP-glucose 4-epimerase4e-0650.4
NC_011601:2211917:2231151223115122321701020Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeUDP-galactose-4-epimerase3e-0650.4
NC_007947:2140000:2145041214504121460451005Methylobacillus flagellatus KT, complete genomeUDP-glucose 4-epimerase3e-0650.4
NC_007434:3452985:3452991345299134540131023Burkholderia pseudomallei 1710b chromosome I, complete sequenceUDP-glucose 4-epimerase3e-0650.4
NC_014624:2211771:222897922289792229623645Eubacterium limosum KIST612 chromosome, complete genomeUDP-glucose 4-epimerase4e-0650.1
NC_010519:1411347:1415647141564714166631017Haemophilus somnus 2336 chromosome, complete genomeUDP-glucose 4-epimerase4e-0650.1
NC_009648:838000:8585368585368595521017Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeUDP-galactose-4-epimerase4e-0650.1
NC_014532:3036109:3045537304553730466101074Halomonas elongata DSM 2581, complete genomeUDP-glucose 4-epimerase5e-0649.7
NC_004463:6924150:6954523695452369555901068Bradyrhizobium japonicum USDA 110, complete genomeUDP-glucose 4-epimerase5e-0649.7