Pre_GI: BLASTP Hits

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Query: NC_010001:2125500:2136755 Clostridium phytofermentans ISDg, complete genome

Start: 2136755, End: 2137093, Length: 339

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:1133759:114270611427061143053348Clostridium clariflavum DSM 19732 chromosome, complete genomehydrogenase nickel incorporation protein HypA3e-29126
NC_015555:114977:121735121735122076342Thermoanaerobacterium xylanolyticum LX-11 chromosome, completehydrogenase nickel incorporation protein hypA5e-1992.8
NC_013921:1614397:162361216236121623953342Thermoanaerobacter italicus Ab9 chromosome, complete genomehydrogenase nickel insertion protein HypA7e-1889.4
NC_014209:1580423:158958615895861589927342Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hydrogenase nickel insertion protein HypA8e-1889
NC_015958:141500:146684146684147025342Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehydrogenase nickel incorporation protein hypA6e-1786.3
NC_015587:28997:435154351543859345Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase nickel incorporation protein hypA1e-1168.2
NC_020411:28995:435134351343857345Hydrogenobaculum sp. HO, complete genomeHydrogenase-3 nickel incorporation protein HypA1e-1168.2
NC_015557:30622:434794347943823345Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase nickel insertion protein HypA1e-1168.2
NC_021182:1983456:199383119938311994172342Clostridium pasteurianum BC1, complete genomehydrogenase nickel insertion protein HypA2e-1167.4
NC_021182:1761789:177248317724831772824342Clostridium pasteurianum BC1, complete genomehydrogenase nickel insertion protein HypA2e-1167.4
NC_007517:3524715:355173235517323552064333Geobacter metallireducens GS-15, complete genomeHydrogenase expression/synthesis, HypA8e-1165.9
NC_014650:1763308:177965217796521779996345Geobacillus sp. Y4.1MC1 chromosome, complete genomehydrogenase nickel insertion protein HypA2e-1064.3
NC_015660:1784553:180087118008711801215345Geobacillus thermoglucosidasius C56-YS93 chromosome, completehydrogenase nickel insertion protein HypA2e-1064.3
NC_012115:961883:972129972129972464336Nautilia profundicola AmH, complete genomehydrogenase expression/synthesis, HypA9e-1062.4
NC_002967:2194829:219783321978332198174342Treponema denticola ATCC 35405, complete genomehydrogenase nickel insertion protein HypA1e-0962
NC_019940:2834850:283683228368322837185354Thioflavicoccus mobilis 8321 chromosome, complete genomehydrogenase nickel incorporation protein HypA2e-0961.2
NC_011740:2986514:300179330017933002134342Escherichia fergusonii ATCC 35469, complete genomeprotein involved with the maturation of hydrogenases 1 and 26e-0856.2
NC_008701:168662:184149184149184559411Pyrobaculum islandicum DSM 4184, complete genomehydrogenase expression/synthesis, HypA8e-0855.8
NC_017192:1841987:185059018505901850931342Arcobacter sp. L, complete genomehydrogenase expression/formation protein HypA1e-0755.1
NC_009801:3013838:301383830138383014188351Escherichia coli E24377A, complete genomehydrogenase nickel insertion protein HypA2e-0754.3
NC_013156:431795:445494445494445877384Methanocaldococcus fervens AG86, complete genomehydrogenase nickel insertion protein HypA3e-0754.3
NC_015565:348941:362919362919363263345Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehydrogenase nickel incorporation protein hypA5e-0753.1
NC_014122:1313303:661366136966354Methanocaldococcus infernus ME chromosome, complete genomehydrogenase nickel insertion protein HypA1e-0651.6
NC_000909:201000:204673204673205047375Methanocaldococcus jannaschii DSM 2661, complete genomehydrogenase expression/formation protein (hypA)3e-0650.8
NC_013407:1610221:161210316121031612480378Methanocaldococcus vulcanius M7, complete genomehydrogenase nickel insertion protein HypA5e-0650.1
NC_009901:2427291:244896224489622449309348Shewanella pealeana ATCC 700345, complete genomehydrogenase expression/synthesis HypA5e-0649.7
NC_007575:1484305:148855614885561488897342Sulfurimonas denitrificans DSM 1251, complete genomehydrogenase expression/synthesis, HypA5e-0649.7
NC_003272:784437:806012806012806353342Nostoc sp. PCC 7120, complete genomehydrogenase expression/formation protein5e-0649.7
NC_007413:5742406:576257157625715762912342Anabaena variabilis ATCC 29413, complete genomeHydrogenase expression/synthesis, HypA6e-0649.7
NC_013959:2449315:244898124489812449322342Sideroxydans lithotrophicus ES-1 chromosome, complete genomehydrogenase nickel insertion protein HypA6e-0649.7
NC_007626:1746475:178144917814491781784336Magnetospirillum magneticum AMB-1, complete genomeHydrogenase nickel incorporation protein hypA8e-0649.3