Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:10718:26032 Kineococcus radiotolerans SRS30216, complete genome

Start: 26032, End: 26952, Length: 921

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008639:2358592:235859223585922359521930Chlorobium phaeobacteroides DSM 266, complete genomediacylglycerol kinase, catalytic region7e-0858.2
NC_012793:383612:385257385257386183927Geobacillus sp. WCH70, complete genomediacylglycerol kinase catalytic region1e-0757
NC_008525:108687:108687108687109649963Pediococcus pentosaceus ATCC 25745, complete genomeDiacylglycerol kinase family protein3e-0756.2
NC_015634:2694706:271568027156802716594915Bacillus coagulans 2-6 chromosome, complete genomediacylglycerol kinase catalytic region4e-0755.8
NC_016023:1769925:177108317710831771997915Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein2e-0653.5