Pre_GI: BLASTP Hits

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Query: NC_009512:5632591:5681300 Pseudomonas putida F1, complete genome

Start: 5681300, End: 5681779, Length: 480

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010694:3055403:307827930782793078806528Erwinia tasmaniensis, complete genomePutative (di)nucleoside polyphosphate hydrolase2e-58224
NC_015633:2565753:260203226020322602550519Vibrio anguillarum 775 chromosome chromosome I, complete sequenceBis(5'-nucleosyl)-tetraphosphatase (asymmetrical)1e-57221
NC_011566:3994239:400853240085324009053522Shewanella piezotolerans WP3, complete genomeNUDIX hydrolase3e-57220
NC_008309:1827809:184681118468111847389579Haemophilus somnus 129PT, complete genome(di)nucleoside polyphosphate hydrolase6e-56216
NC_009438:1282022:128553712855371286061525Shewanella putrefaciens CN-32 chromosome, complete genomedinucleoside polyphosphate hydrolase1e-55215
NC_008750:3435495:344676234467623447286525Shewanella sp. W3-18-1, complete genomeNUDIX hydrolase1e-55215
NC_013960:3379515:338756233875623388110549Nitrosococcus halophilus Nc4 chromosome, complete genomeNUDIX hydrolase1e-54211
NC_013960:3379515:338597933859793386527549Nitrosococcus halophilus Nc4 chromosome, complete genomeNUDIX hydrolase3e-54210
NC_007086:557789:580931580931581548618Xanthomonas campestris pv. campestris str. 8004, complete genomedinucleoside polyphosphate hydrolase1e-52205
NC_003902:555699:578847578847579464618Xanthomonas campestris pv. campestris str. ATCC 33913, completedinucleoside polyphosphate hydrolase1e-52205
NC_004556:1933944:194377019437701944342573Xylella fastidiosa Temecula1, complete genomedinucleoside polyphosphate hydrolase4e-51199
NC_008789:942309:963529963529964074546Halorhodospira halophila SL1, complete genomeNUDIX hydrolase2e-49194
NC_015731:867377:872002872002872562561Nitrosomonas sp. Is79A3 chromosome, complete genomeRNA pyrophosphohydrolase8e-43172
NC_002929:3568106:357152435715243572096573Bordetella pertussis Tohama I, complete genomedinucleoside polyphosphate hydrolase8e-42169
NC_017223:3608749:361170936117093612281573Bordetella pertussis CS chromosome, complete genomedinucleoside polyphosphate hydrolase8e-42169
NC_015222:2136657:215045421504542151014561Nitrosomonas sp. AL212 chromosome, complete genomeNUDIX hydrolase1e-41168
NC_008786:2687688:270731727073172707982666Verminephrobacter eiseniae EF01-2, complete genomeNUDIX hydrolase2e-41167
NC_014910:966761:987044987044987718675Alicycliphilus denitrificans BC chromosome, complete genomenudix hydrolase5e-41166
NC_015422:910292:932306932306932980675Alicycliphilus denitrificans K601 chromosome, complete genomeNUDIX hydrolase5e-41166
NC_010084:3051355:305135530513553052002648Burkholderia multivorans ATCC 17616 chromosome 1, completedinucleoside polyphosphate hydrolase5e-39159
NC_010804:450130:472771472771473418648Burkholderia multivorans ATCC 17616 chromosome 1, completeputative (di)nucleoside polyphosphate hydrolase5e-39159
NC_011761:1904637:192711919271191927649531Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeNUDIX hydrolase6e-38156
NC_018644:137755:175855175855176328474Alpha proteobacterium HIMB59 chromosome, complete genomeNUDIX-domain protein1e-24112
NC_007109:1105251:111057511105751111060486Rickettsia felis URRWXCal2, complete genomedinucleoside polyphosphate hydrolase8e-23105
NC_015186:1126830:112779211277921128286495Acidiphilium multivorum AIU301, complete genomeRNA pyrophosphohydrolase2e-22105
NC_017059:2771085:277108527710852771573489Rhodospirillum photometricum DSM 122, complete genomeRNA pyrophosphohydrolase4e-21100
NC_007205:221539:226898226898227374477Candidatus Pelagibacter ubique HTCC1062, complete genomeprobable (di)nucleoside polyphosphate hydrolase1e-1788.6
NC_013510:5499447:550561555056155506091477Thermomonospora curvata DSM 43183, complete genomeNUDIX hydrolase1e-0652
NC_015944:384119:3970483970483982771230Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceputative sugar phosphatase of HAD superfamily7e-0649.7