Pre_GI: BLASTP Hits

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Query: NC_009512:469000:492315 Pseudomonas putida F1, complete genome

Start: 492315, End: 492671, Length: 357

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:632869:653893653893654246354Pseudomonas aeruginosa UCBPP-PA14, complete genomedihydroneopterin aldolase2e-28124
NC_009434:796878:819946819946820299354Pseudomonas stutzeri A1501, complete genomedihydroneopterin aldolase9e-28122
NC_016445:2938887:296905029690502969403354Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completedihydroneopterin aldolase5e-1683.2
NC_008260:2340824:234476223447622345178417Alcanivorax borkumensis SK2, complete genomedihydroneopterin aldolase7e-1579.3
NC_008800:4013298:401427840142784014637360Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase9e-1475.5
NC_011901:342777:367361367361367717357Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completedihydroneopterin aldolase2e-1374.7
NC_016816:674171:692576692576692935360Pantoea ananatis LMG 5342, complete genomebifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase1e-1271.6
NC_014837:3739408:374166737416673742026360Pantoea sp. At-9b chromosome, complete genomedihydroneopterin aldolase8e-1268.9
NC_011852:1482343:149846314984631498810348Haemophilus parasuis SH0165, complete genomedihydroneopterin aldolase7e-0959.3
NC_014733:2363838:238426523842652384660396Methylovorus sp. MP688 chromosome, complete genomedihydroneopterin aldolase5e-0856.2
NC_012969:2476318:251541525154152515765351Methylovorus glucosetrophus SIP3-4 chromosome, complete genomedihydroneopterin aldolase6e-0856.2
NC_007947:2447635:248549024854902485864375Methylobacillus flagellatus KT, complete genomedihydroneopterin aldolase3e-0754.3