Pre_GI: BLASTP Hits

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Query: NC_009512:2238437:2248092 Pseudomonas putida F1, complete genome

Start: 2248092, End: 2249192, Length: 1101

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014019:3543389:3544262354426235454311170Bacillus megaterium QM B1551 chromosome, complete genomelow temperature requirement protein LtrA1e-34147
NC_013768:418000:4271214271214282361116Listeria monocytogenes 08-5923, complete genomelow temperature requirement protein A1e-27124
NC_013766:417991:4271004271004282151116Listeria monocytogenes 08-5578 chromosome, complete genomelow temperature requirement protein A1e-27124
NC_013891:353625:3623003623003634181119Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomehypothetical protein1e-27124
NC_003210:403743:4128494128494139641116Listeria monocytogenes EGD-e, complete genomelow temperature requirement protein A2e-27123
NC_010999:2483000:2484384248438424855051122Lactobacillus casei, complete genomeLow temperature requirement protein LtrA1e-0964.7
NC_013199:2386924:2391442239144223925601119Lactobacillus rhamnosus Lc 705, complete genomeconserved hypothetical protein (membrane protein by homology)7e-0962
NC_018750:3315309:3335535333553533367401206Streptomyces venezuelae ATCC 10712, complete genomeputative integral membrane protein2e-0860.5
NC_012121:1676367:169808016980801698913834Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein4e-0756.2
NC_017186:8683964:8699096869909687003011206Amycolatopsis mediterranei S699 chromosome, complete genomelow temperature requirement protein A5e-0652.4
NC_014318:8687448:8699040869904087002451206Amycolatopsis mediterranei U32 chromosome, complete genomelow temperature requirement protein A5e-0652.4
NC_009009:219087:2239022239022250471146Streptococcus sanguinis SK36, complete genomehypothetical protein9e-0651.6