Pre_GI: BLASTP Hits

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Query: NC_009512:1518113:1534187 Pseudomonas putida F1, complete genome

Start: 1534187, End: 1535050, Length: 864

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009952:592000:596939596939597799861Dinoroseobacter shibae DFL 12, complete genomeamidohydrolase family protein4e-56218
NC_004129:4093610:4101896410189641035061611Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, GntR family/amidohydrolase family protein3e-49195
NC_013209:1406793:142338814233881424269882Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator GntR3e-44179
NC_017100:1407804:142439914243991425280882Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator GntR3e-44179
NC_017108:1406787:142338214233821424263882Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator GntR3e-44179
NC_017111:1406787:142338214233821424263882Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator GntR3e-44179
NC_017121:1406787:142338214233821424263882Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator GntR3e-44179
NC_017125:1407804:142439914243991425280882Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator GntR3e-44179
NC_017146:1407804:142439914243991425280882Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator GntR3e-44179
NC_017150:1406793:142338814233881424269882Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator GntR3e-44179
NC_008543:2474002:248751024875102488442933Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceamidohydrolase 26e-44177
NC_008061:2773670:277856527785652779497933Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceamidohydrolase 26e-44177
NC_010515:1900967:190586219058621906794933Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceamidohydrolase 21e-43177
NC_015458:3390674:339681333968133397694882Pusillimonas sp. T7-7 chromosome, complete genomeamidohydrolase 24e-43175
NC_015733:1976752:199438519943851995278894Pseudomonas putida S16 chromosome, complete genomehypothetical protein4e-41168
NC_004129:4093610:409963040996304100520891Pseudomonas fluorescens Pf-5, complete genomeamidohydrolase2e-40166
NC_014539:743523:748293748293749216924Burkholderia sp. CCGE1003 chromosome 1, complete sequenceamidohydrolase 21e-36153
NC_011892:352652:362752362752363594843Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeamidohydrolase 29e-31134
NC_010511:871905:886292886292887188897Methylobacterium sp. 4-46 chromosome, complete genomeamidohydrolase 23e-29129
NC_007492:3180480:322305532230553223909855Pseudomonas fluorescens PfO-1, complete genomeAmidohydrolase 27e-28124
NC_011740:3739395:374593937459393746757819Escherichia fergusonii ATCC 35469, complete genomeputative hydrolase3e-26119
NC_007963:2777066:278181927818192782682864Chromohalobacter salexigens DSM 3043, complete genomeamidohydrolase 25e-26118
NC_007651:3064530:306586430658643066790927Burkholderia thailandensis E264 chromosome I, complete sequencehydrolase1e-22107
NC_007434:1923000:1945799194579919469051107Burkholderia pseudomallei 1710b chromosome I, complete sequencehydrolase1e-21103
NC_009074:1555500:156911215691121570086975Burkholderia pseudomallei 668 chromosome I, complete sequencehydrolase1e-21103
NC_006350:2427000:243005424300542431037984Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative hydrolase9e-22103
NC_009076:1566500:157881215788121579795984Burkholderia pseudomallei 1106a chromosome I, complete sequenceamidohydrolase family protein9e-22103
NC_010617:774914:825343825343826125783Kocuria rhizophila DC2201, complete genomeputative hydrolase2e-1376.3
NC_009664:4423829:451546045154604516224765Kineococcus radiotolerans SRS30216, complete genomeamidohydrolase 22e-1169.7
NC_015914:4489601:450853245085324509479948Cyclobacterium marinum DSM 745 chromosome, complete genomeamidohydrolase 25e-0961.6