Pre_GI: BLASTP Hits

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Query: NC_009439:860571:876061 Pseudomonas mendocina ymp, complete genome

Start: 876061, End: 878361, Length: 2301

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:969526:9838179838179861172301Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein01334
NC_020829:1068438:1082363108236310846572295Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein01006
NC_018080:5070687:5074448507444850767032256Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein01003
NC_018868:3943088:3959991395999139622672277Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein2e-145516
NC_010995:3197686:3201370320137032038352466Cellvibrio japonicus Ueda107, complete genomehypothetical protein1e-120434
NC_007645:1785000:1789912178991217921732262Hahella chejuensis KCTC 2396, complete genomehypothetical protein1e-120434
NC_008740:2563278:2586448258644825886552208Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF16311e-111404
NC_007912:1111093:1132283113228311348112529Saccharophagus degradans 2-40, complete genomehypothetical protein4e-110399
NC_009439:860571:8605718605718629162346Pseudomonas mendocina ymp, complete genomehypothetical protein1e-66255
NC_015556:4074367:4099431409943141016862256Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF16315e-58226