Pre_GI: BLASTP Hits

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Query: NC_009439:637193:641179 Pseudomonas mendocina ymp, complete genome

Start: 641179, End: 641913, Length: 735

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015556:4543380:456882345688234569557735Pseudomonas fulva 12-X chromosome, complete genomelipopolysaccharide kinase6e-106383
NC_015740:4072415:408846640884664089200735Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completelipopolysaccharide kinase1e-98359
NC_009434:4140362:415968141596814160397717Pseudomonas stutzeri A1501, complete genomeserine/threonine protein kinase1e-94345
NC_015410:709947:709947709947710336390Pseudomonas mendocina NK-01 chromosome, complete genomelipopolysaccharide kinase2e-54211
NC_009439:637193:640382640382641179798Pseudomonas mendocina ymp, complete genomelipopolysaccharide kinase7e-0754.3