Pre_GI: BLASTP Hits

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Query: NC_009439:2337024:2359041 Pseudomonas mendocina ymp, complete genome

Start: 2359041, End: 2359796, Length: 756

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017047:3869350:387552238755223876274753Rahnella aquatilis HX2 chromosome, complete genomepeptidase M48 Ste24p5e-69260
NC_016818:3816000:381975838197583820510753Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeZn-dependent protease with chaperone function5e-69260
NC_015061:3801927:380813238081323808884753Rahnella sp. Y9602 chromosome, complete genomepeptidase M48 Ste24p6e-69260
NC_011094:1050700:107256710725671073328762Salmonella enterica subsp. enterica serovar Schwarzengrund strpeptidase M48, Ste24p5e-67254
NC_007645:6991163:699263469926346993395762Hahella chejuensis KCTC 2396, complete genomeputative Zn-dependent protease, contains TPR repeats2e-36152
NC_014844:1818939:183921718392171840155939Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomepeptidase M48 Ste24p1e-33143
NC_016745:3170384:317038431703843171124741Oceanimonas sp. GK1 chromosome, complete genomeTPR repeat-containing Zn-dependent protease2e-32139
NC_015164:2626503:264672326467232647535813Bacteroides salanitronis DSM 18170 chromosome, complete genomepeptidase M48 Ste24p4e-30131
NC_008599:128431:128431128431129237807Campylobacter fetus subsp. fetus 82-40, complete genomepeptidase M48, Ste24p1e-0963.5
NC_015385:2050648:205064820506482051457810Treponema succinifaciens DSM 2489 chromosome, complete genomepeptidase M48 Ste24p1e-0963.5
NC_010730:578493:5956995956995969731275Sulfurihydrogenibium sp. YO3AOP1, complete genomepeptidase M48 Ste24p2e-0860.1
NC_011296:801612:8165938165938178761284Thermodesulfovibrio yellowstonii DSM 11347, complete genomepeptidase, M48 family4e-0755.5
NC_008702:1094663:111616311161631116984822Azoarcus sp. BH72, complete genomeconserved hypothetical secreted protein1e-0653.5
NC_007404:1260500:127305612730561273832777Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein1e-0653.5