Pre_GI: BLASTP Hits

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Query: NC_009381:1783886:1822292 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1822292, End: 1823296, Length: 1005

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010002:2933909:2933909293390929349551047Delftia acidovorans SPH-1, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system9e-117420
NC_015733:2581324:2584695258469525866471953Pseudomonas putida S16 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-91337
NC_015733:2581324:261910826191082620013906Pseudomonas putida S16 chromosome, complete genomeglycine betaine transporter, periplasmic subunit4e-81301
NC_015556:1188500:1209552120955212105861035Pseudomonas fulva 12-X chromosome, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system1e-48194
NC_015137:868944:8859448859448869721029Burkholderia sp. CCGE1001 chromosome 2, complete sequenceglycine betaine ABC transporter substrate-binding protein2e-48192
NC_015137:868944:8834978834978845221026Burkholderia sp. CCGE1001 chromosome 2, complete sequenceglycine betaine ABC transporter substrate-binding protein2e-41169
NC_016625:171341:183789183789184640852Burkholderia sp. YI23 chromosome 2, complete sequenceputative substrate-binding component of ABC transporter5e-1272
NC_012660:3179980:320234932023493203320972Pseudomonas fluorescens SBW25 chromosome, complete genomeputative glycine betaine/L-proline ABC transporter substrate-binding periplasmic protein3e-1169.7
NC_015379:4426827:444269444426944443542849Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Glycine betaine ABC transporter, periplasmic component2e-0963.5
NC_007492:3180480:320396432039643204941978Pseudomonas fluorescens PfO-1, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system5e-0858.9
NC_004193:3578710:359200635920063592899894Oceanobacillus iheyensis HTE831, complete genomeglycine betaine ABC transporter glycine betaine-binding protein7e-0858.2