Pre_GI: BLASTP Hits

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Query: NC_009380:3384737:3396406 Salinispora tropica CNB-440 chromosome, complete genome

Start: 3396406, End: 3397734, Length: 1329

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2751342:2769752276975227710591308Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transporter, membrane protein6e-61235
NC_011770:2804218:2816136281613628174461311Pseudomonas aeruginosa LESB58, complete genomeputative nrbE-like protein5e-59228
NC_016616:1182125:1187063118706311884001338Dechlorosoma suillum PS chromosome, complete genomearabinose efflux permease family protein1e-55217
NC_010943:9294:3122031220325541335Stenotrophomonas maltophilia K279a, complete genomeputative MFS family transporter protein4e-54212
NC_006361:2920028:2937977293797729392241248Nocardia farcinica IFM 10152, complete genomeputative transporter2e-50200
NC_008254:2496622:251445525144552515378924Mesorhizobium sp. BNC1, complete genomeputative NreB protein1e-24114
NC_020157:36234:4601746017474081392Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequencemajor facilitator superfamily MFS_17e-1995.5
NC_020911:1776670:1778183177818317795051323Octadecabacter antarcticus 307, complete genomeputative MFS-type transporter6e-1479.3
NC_012668:3037345:304679030467903047173384Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein6e-0962.4