Pre_GI: BLASTP Hits

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Query: NC_009012:1934107:1951335 Clostridium thermocellum ATCC 27405, complete genome

Start: 1951335, End: 1951607, Length: 273

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014410:800500:822458822458822730273Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, AbrB family6e-45179
NC_008346:2251353:225380622538062254081276Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeregulators of stationary/sporulation gene expression4e-1476.6
NC_012471:719000:737597737597737776180Streptococcus equi subsp. equi 4047, complete genomeconjugative transposon regulatory protein4e-0856.6
NC_012470:1390285:140716114071611407340180Streptococcus equi subsp. zooepidemicus, complete genomeregulatory protein9e-0855.8
NC_009089:2150062:215352821535282153713186Clostridium difficile 630, complete genomeputative conjugative transposon regulatory protein1e-0755.5
NC_012470:1390285:142815014281501428329180Streptococcus equi subsp. zooepidemicus, complete genomeregulatory protein2e-0754.3