Pre_GI: BLASTP Hits

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Query: NC_008258:1750964:1756094 Shigella flexneri 5 str. 8401, complete genome

Start: 1756094, End: 1756852, Length: 759

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Shigella spp. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004741:1792442:179451117945111795269759Shigella flexneri 2a str. 2457T, complete genome3-dehydroquinate dehydratase2e-144511
NC_012880:1585255:158930715893071590065759Dickeya dadantii Ech703, complete genome3-dehydroquinate dehydratase, type I1e-104379
NC_011035:933269:934515934515935279765Neisseria gonorrhoeae NCCP11945 chromosome, complete genome3-dehydroquinate dehydratase2e-59229
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome3e-59228
NC_004193:375416:456497456497457270774Oceanobacillus iheyensis HTE831, complete genome3-dehydroquinate dehydratase3e-59228
NC_008767:1363288:137963113796311380428798Neisseria meningitidis FAM18, complete genome3-dehydroquinate dehydratase2e-58225
NC_009922:2487492:250881225088122509579768Alkaliphilus oremlandii OhILAs, complete genome3-dehydroquinate dehydratase, type I5e-58224
NC_016938:1830500:183115918311591831938780Melissococcus plutonius DAT561 chromosome 1, complete genome3-dehydroquinate dehydratase2e-54212
NC_014727:95875:958759587596330456Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,3-dehydroquinate dehydratase, type i1e-33143
NC_011999:558057:574043574043574765723Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein5e-31134
NC_002952:884500:903179903179903895717Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative type I 3-dehydroquinase4e-26118
NC_016894:3329562:333460833346083335366759Acetobacterium woodii DSM 1030 chromosome, complete genome3-dehydroquinate dehydratase6e-26117
NC_016928:838500:857085857085857801717Staphylococcus aureus subsp. aureus M013 chromosome, complete3-dehydroquinate dehydratase3e-25115
NC_017351:885000:903296903296904012717Staphylococcus aureus subsp. aureus 11819-97 chromosome, complete3-dehydroquinate dehydratase4e-25115
NC_017337:853221:874402874402875118717Staphylococcus aureus subsp. aureus ED133 chromosome, complete3-dehydroquinate dehydratase4e-25114
NC_002745:840848:863260863260863976717Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein1e-24113
NC_009785:1414892:141814014181401418817678Streptococcus gordonii str. Challis substr. CH1, complete genome3-dehydroquinate dehydratase, type I4e-24111
NC_013169:87269:872698726988075807Kytococcus sedentarius DSM 20547, complete genome3-dehydroquinate dehydratase4e-22104
NC_007955:2074844:210028721002872100988702Methanococcoides burtonii DSM 6242, complete genome3-dehydroquinate dehydratase, type I7e-22104
NC_000909:1408276:142396314239631424625663Methanocaldococcus jannaschii DSM 2661, complete genome3-dehydroquinate dehydratase (aroD)6e-1994.4
NC_012438:818387:824923824923825672750Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genome3-dehydroquinate dehydratase, type I2e-1789.4
NC_019977:253895:259311259311260015705Methanomethylovorans hollandica DSM 15978, complete genome3-dehydroquinate dehydratase, type I1e-1686.7
NC_009954:1893206:189320618932061893997792Caldivirga maquilingensis IC-167, complete genome3-dehydroquinate dehydratase9e-1684
NC_007681:657351:669351669351670058708Methanosphaera stadtmanae DSM 3091, complete genomeAroD2e-1582.8
NC_015474:252390:276176276176276817642Pyrococcus sp. NA2 chromosome, complete genome3-dehydroquinate dehydratase2e-1479.3
NC_014222:1045281:106592510659251066665741Methanococcus voltae A3 chromosome, complete genome3-dehydroquinate dehydratase, type I3e-1478.6
NC_000918:1:900190019660660Aquifex aeolicus VF5, complete genome3-dehydroquinate dehydratase4e-1478.6
NC_003551:390268:402699402699403346648Methanopyrus kandleri AV19, complete genome3-dehydroquinate dehydratase6e-1477.8
NC_014804:341663:350443350443351093651Thermococcus barophilus MP chromosome, complete genome3-dehydroquinate dehydratase I4e-1375.1
NC_000868:416958:432012432012432659648Pyrococcus abyssi GE5, complete genome3-dehydroquinate dehydratase2e-1272.8
NC_013741:1390823:141254414125441413149606Archaeoglobus profundus DSM 5631, complete genome3-dehydroquinate dehydratase, type I2e-1169.7
NC_008701:1607419:162501516250151625902888Pyrobaculum islandicum DSM 4184, complete genome3-dehydroquinate dehydratase, type I1e-0860.5