Pre_GI: BLASTP Hits

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Query: NC_008146:1535827:1559815 Mycobacterium sp. MCS, complete genome

Start: 1559815, End: 1560789, Length: 975

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1557711:156412315641231565097975Mycobacterium sp. KMS, complete genomeconserved hypothetical protein9e-162569
NC_009077:4774499:478026347802634781219957Mycobacterium sp. JLS, complete genomehypothetical protein3e-111401
NC_008347:2515921:252802925280292528883855Maricaulis maris MCS10, complete genomehypothetical protein1e-69263
NC_018080:3088866:311163231116323112111480Pseudomonas aeruginosa DK2 chromosome, complete genomesterol desaturase-like protein2e-1893.2
NC_003296:903947:9155199155199166761158Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN1e-1584
NC_015711:5163000:517688951768895177716828Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-1170.5
NC_010627:532407:544175544175545029855Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencefatty acid hydroxylase1e-0861.2
NC_015186:2197236:226819622681962269035840Acidiphilium multivorum AIU301, complete genomehypothetical protein2e-0757.4
NC_013960:452493:461392461392462267876Nitrosococcus halophilus Nc4 chromosome, complete genomefatty acid hydroxylase2e-0756.6
NC_011138:3182807:319177131917713192574804Alteromonas macleodii 'Deep ecotype', complete genomesterol desaturase-related protein2e-0756.6
NC_014120:88679:898738987390727855Burkholderia sp. CCGE1002 plasmid pBC201, complete sequencefatty acid hydroxylase1e-0654.3
NC_013960:1693643:169871216987121699572861Nitrosococcus halophilus Nc4 chromosome, complete genomefatty acid hydroxylase1e-0653.9
NC_012917:4646491:4666541466654146676651125Pectobacterium carotovorum subsp. carotovorum PC1, complete genomefatty acid hydroxylase6e-0652
NC_008596:2873675:287456428745642875436873Mycobacterium smegmatis str. MC2 155, complete genomeC-5 sterol desaturase8e-0651.6