Pre_GI: BLASTP Hits

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Query: NC_007953:504939:507569 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 507569, End: 508720, Length: 1152

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007908:1252189:1255466125546612566051140Rhodoferax ferrireducens T118, complete genometransposase IS116/IS110/IS9021e-110400
NC_014722:1467996:1478982147898214801361155Burkholderia rhizoxinica HKI 454, complete genometransposase5e-46185
NC_007951:1042291:1044255104425510454031149Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase9e-45181
NC_008686:95326:1190031190031206221620Paracoccus denitrificans PD1222 chromosome 1, complete sequencetransposase IS116/IS110/IS902 family protein2e-43176
NC_014923:5909000:5911082591108259122421161Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completetransposase IS116/IS110/IS902 family protein4e-40165
NC_019973:5838000:5840042584004258412021161Mesorhizobium australicum WSM2073, complete genometransposase4e-40165
NC_015675:6464000:6465753646575364669131161Mesorhizobium opportunistum WSM2075 chromosome, complete genometransposase IS116/IS110/IS902 family protein4e-40165
NC_010511:4258000:4295569429556942966691101Methylobacterium sp. 4-46 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-33143
NC_011894:4013830:4013830401383040149901161Methylobacterium nodulans ORS 2060, complete genometransposase IS116/IS110/IS902 family protein2e-33143
NC_007964:3036771:3058650305865030598071158Nitrobacter hamburgensis X14, complete genometransposase IS116/IS110/IS9023e-31136
NC_007964:2152000:2170384217038421715411158Nitrobacter hamburgensis X14, complete genometransposase IS116/IS110/IS9026e-31135
NC_002678:4885790:489150148915014892301801Mesorhizobium loti MAFF303099, complete genometransposase1e-22107
NC_010125:1651687:165168716516871652586900Gluconacetobacter diazotrophicus PAl 5, complete genomeputative tranposase protein7e-2098.6
NC_010125:3067301:3078511307851130795541044Gluconacetobacter diazotrophicus PAl 5, complete genometransposase2e-1997.1
NC_010125:3067301:3076835307683530778781044Gluconacetobacter diazotrophicus PAl 5, complete genometransposase IS116/IS110/IS902 family protein3e-1996.7
NC_014923:5970182:5985125598512559862881164Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-1791.3
NC_015675:6538500:6539793653979365409651173Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-1790.9
NC_004463:9087290:909089090908909091855966Bradyrhizobium japonicum USDA 110, complete genomeputative transposase1e-1790.9
NC_010125:1538335:1559745155974515607851041Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transposase3e-1789.7
NC_014923:5970182:5990318599031859914481131Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete6e-1685.5
NC_011751:3453683:3474872347487234760051134Escherichia coli UMN026 chromosome, complete genometransposase, IS110 family8e-0962
NC_007946:4779745:4811641481164148127741134Escherichia coli UTI89, complete genomehypothetical protein1e-0861.6
NC_007517:3151742:315819431581943159192999Geobacter metallireducens GS-15, complete genomeIS111A/IS1328/IS1533/IS116/IS110/IS902 transposase3e-0860.1
NC_010511:3106418:3123659312365931247681110Methylobacterium sp. 4-46 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-0757.4
NC_010627:127968:1284341284341295641131Burkholderia phymatum STM815 plasmid pBPHY02, complete sequencetransposase IS116/IS110/IS902 family protein1e-0654.7
NC_009255:1105786:1132044113204411331231080Burkholderia vietnamiensis G4 chromosome 2, complete sequencetransposase IS116/IS110/IS902 family protein2e-0653.9
NC_010805:575709:5824475824475835261080Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu29 transposase2e-0653.9
NC_016907:1:8002800290361035Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceputative transposase9e-0651.6