Pre_GI: BLASTP Hits

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Query: NC_007951:925442:927575 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 927575, End: 928306, Length: 732

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015136:813701:835121835121835852732Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein1e-93342
NC_004129:1014986:102630110263011027017717Pseudomonas fluorescens Pf-5, complete genomeProtein of unknown function (DUF541) superfamily1e-25116
NC_008781:2655071:268244126824412683166726Polaromonas naphthalenivorans CJ2, complete genomeprotein of unknown function DUF5414e-24111
NC_009053:1668500:167194716719471672663717Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein4e-0858.5
NC_010939:1633000:163415116341511634867717Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein9e-0857.4
NC_010278:1625695:162912116291211629837717Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,periplasmic/secreted protein1e-0756.6