Pre_GI: BLASTP Hits

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Query: NC_007951:570500:603411 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 603411, End: 604415, Length: 1005

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009485:7626677:7643071764307176443781308Bradyrhizobium sp. BTAi1 chromosome, complete genomemanganese transport protein1e-70267
NC_011894:6259649:6269804626980462711471344Methylobacterium nodulans ORS 2060, complete genomenatural resistance-associated macrophage protein4e-70265
NC_010508:1865602:1880259188025918815451287Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencenatural resistance-associated macrophage protein6e-60231
NC_017249:3181976:3200135320013532014991365Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-55216
NC_007953:572926:5729265729265742151290Burkholderia xenovorans LB400 chromosome 3, complete sequenceMn2+/Fe2+ transporter, NRAMP family1e-54213
NC_011983:508287:5082875082875096031317Agrobacterium radiobacter K84 chromosome 2, complete genomemanganese transport protein8e-47187
NC_009441:3597020:3607615360761536088771263Flavobacterium johnsoniae UW101 chromosome, complete genomenatural resistance-associated macrophage protein5e-31135
NC_011146:3720658:3729560372956037307861227Geobacter bemidjiensis Bem, complete genomenatural resistance-associated macrophage protein4e-1272.4
NC_014328:1739578:1739578173957817408311254Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative divalent cation transporter1e-1170.9
NC_020291:1871846:1890352189035218915931242Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeMn2+ and Fe2+ transporters of the NRAMP family4e-0962.8
NC_013204:74855:1010231010231023391317Eggerthella lenta DSM 2243, complete genomenatural resistance-associated macrophage protein9e-0651.6