Pre_GI: BLASTP Hits

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Query: NC_007951:1928906:1948245 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1948245, End: 1948715, Length: 471

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007952:3283394:331868133186813319154474Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein3e-51200
NC_010170:1219641:124092712409271241412486Bordetella petrii, complete genomehypothetical protein9e-23105
NC_007510:1959883:198837019883701988852483Burkholderia sp. 383 chromosome 1, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase2e-22104
NC_018868:4010615:401208840120884012456369Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase6e-1373.2
NC_008702:4064470:407104340710434071537495Azoarcus sp. BH72, complete genomehypothetical protein5e-1063.5