Pre_GI: BLASTP Hits

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Query: NC_007925:2892371:2892371 Rhodopseudomonas palustris BisB18, complete genome

Start: 2892371, End: 2892880, Length: 510

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014532:3036109:304138330413833041883501Halomonas elongata DSM 2581, complete genometranscription antitermination protein NusB1e-1375.9
NC_010003:1052997:107106710710671071522456Petrotoga mobilis SJ95, complete genomeNusB antitermination factor1e-1272.8
NC_018604:2053585:207551220755122076036525Brachyspira pilosicoli WesB complete genometranscription antitermination protein NusB1e-1272.4
NC_018607:805966:816447816447816971525Brachyspira pilosicoli B2904 chromosome, complete genometranscription antitermination protein NusB2e-1272
NC_014330:609982:629102629102629626525Brachyspira pilosicoli 95/1000 chromosome, complete genometranscription antitermination protein NusB2e-1272
NC_015731:169989:170468170468170968501Nitrosomonas sp. Is79A3 chromosome, complete genomeNusB antitermination factor1e-1168.9
NC_014219:2491021:249443924944392494843405Bacillus selenitireducens MLS10 chromosome, complete genomeNusB antitermination factor6e-1167
NC_012724:829830:852442852442852879438Burkholderia glumae BGR1 chromosome 1, complete genomeNusB antitermination factor1e-1066.2
NC_007651:1726472:173153017315301731967438Burkholderia thailandensis E264 chromosome I, complete sequencetranscription antitermination factor NusB1e-1065.9
NC_011244:94756:117305117305117745441Borrelia recurrentis A1, complete genometranscription antitermination protein NusB1e-1065.5
NC_008781:3056407:307431930743193074840522Polaromonas naphthalenivorans CJ2, complete genomeNusB antitermination factor3e-1064.7
NC_007510:973828:979842979842980279438Burkholderia sp. 383 chromosome 1, complete sequencetranscription antitermination protein NusB7e-1063.2
NC_012856:737170:738398738398738865468Ralstonia pickettii 12D chromosome 1, complete genomeNusB antitermination factor1e-0962.4
NC_019940:203718:220653220653221168516Thioflavicoccus mobilis 8321 chromosome, complete genometranscription antitermination factor NusB3e-0961.2
NC_010682:701912:701912701912702379468Ralstonia pickettii 12J chromosome 1, complete sequenceNusB antitermination factor3e-0961.2
NC_018691:896464:922490922490922969480Alcanivorax dieselolei B5 chromosome, complete genometranscription antitermination protein NusB4e-0960.8
NC_014652:1758787:176014817601481760552405Caldicellulosiruptor hydrothermalis 108 chromosome, completenusb antitermination factor5e-0960.5
NC_004061:498483:509330509330509758429Buchnera aphidicola str. Sg (Schizaphis graminum), complete genometranscription antitermination protein NusB8e-0959.7
NC_017259:480656:487019487019487450432Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,transcription antitermination protein NusB3e-0858.2
NC_020181:2714559:275404027540402754459420Enterobacter aerogenes EA1509E, complete genomeTranscription termination protein NusB3e-0858.2
NC_016783:1313008:135085713508571351456600Corynebacterium diphtheriae INCA 402 chromosome, complete genomeN utilization substance protein B-like protein3e-0858.2
NC_016788:1315877:132596813259681326567600Corynebacterium diphtheriae HC04 chromosome, complete genomeN utilization substance protein B3e-0858.2
NC_016802:1317365:132745713274571328056600Corynebacterium diphtheriae HC02 chromosome, complete genomeN utilization substance protein B3e-0858.2
NC_008340:420126:423528423528424064537Alkalilimnicola ehrlichei MLHE-1, complete genomeNusB antitermination factor3e-0857.8
NC_002935:1315019:135286613528661353414549Corynebacterium diphtheriae NCTC 13129, complete genometranscription antitermination protein NusB3e-0857.8
NC_015185:875324:887673887673888095423Desulfurobacterium thermolithotrophum DSM 11699 chromosome,NusB antitermination factor4e-0857.8
NC_016800:1344189:135512213551221355721600Corynebacterium diphtheriae BH8 chromosome, complete genomeN utilization substance protein B6e-0857
NC_016789:1334514:137236513723651372964600Corynebacterium diphtheriae PW8 chromosome, complete genomeN utilization substance protein B6e-0857
NC_016785:1297208:130814113081411308740600Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeN utilization substance protein B6e-0857
NC_016048:2243108:224439022443902244842453Oscillibacter valericigenes Sjm18-20, complete genomeantitermination protein NusB6e-0857
NC_016801:1361597:137168513716851372284600Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeN utilization substance protein B6e-0857
NC_016782:1316467:132655813265581327157600Corynebacterium diphtheriae 241 chromosome, complete genomeN utilization substance protein B6e-0857
NC_016786:1316436:132652813265281327127600Corynebacterium diphtheriae HC01 chromosome, complete genomeN utilization substance protein B6e-0857
NC_016787:1276983:131597613159761316575600Corynebacterium diphtheriae HC03 chromosome, complete genomeN utilization substance protein B6e-0857
NC_016790:1259356:129335812933581293957600Corynebacterium diphtheriae VA01 chromosome, complete genomeN utilization substance protein B6e-0857
NC_016799:1343020:138201013820101382609600Corynebacterium diphtheriae 31A chromosome, complete genomeN utilization substance protein B5e-0857
NC_002528:505951:508106508106508537432Buchnera aphidicola str. APS (Acyrthosiphon pisum), completetranscription antitermination protein NusB2e-0755.5
NC_010830:475248:4891174891174902531137Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-0754.3
NC_013204:2955500:297178429717842972371588Eggerthella lenta DSM 2243, complete genomeNusB antitermination factor8e-0753.1
NC_015738:629297:648993648993649520528Eggerthella sp. YY7918, complete genometranscription termination factor9e-0753.1
NC_010520:2061502:207968120796812080106426Clostridium botulinum A3 str. Loch Maree, complete genomeN utilization substance protein B1e-0652.8
NC_013169:1290000:130395113039511304364414Kytococcus sedentarius DSM 20547, complete genomeNusB antitermination factor2e-0651.6
NC_014972:847099:851362851362851784423Desulfobulbus propionicus DSM 2032 chromosome, complete genomeNusB antitermination factor2e-0651.6
NC_011661:1049767:106035510603551060789435Dictyoglomus turgidum DSM 6724, complete genomeNusB antitermination factor6e-0650.1